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queeems: Quantify the Extent of Evolutionary Evidence in Molecular Sequences4 months ago
Introduction | Installation | Data | Example application of queeems | Tree length analyses | Natural selection analyses | Conclusion | Citation | Version Information | Session info | References
queeems 1.1.1Hassan Sadiqqueeems.Rmd
scoup: Simulate Codons with Darwinian Selection Incorporated as an Ornstein-Uhlenbeck Process2 years ago
Introduction | Installation | Sample Code | Ornstein-Uhlenbeck Sensitivity | vN/vS Sensitivity | Site-wise Application | Branch-wise (Episodic) Test | Conclusion | Citation | References | Appendix: Sample Data Analyses (Non-R) Code | Session info
scoup 1.7.0Hassan Sadiqscoup.Rmd